Comp-phys-alps-users

comp-phys-alps-users@lists.phys.ethz.ch

1 participants
1248 discussions

Time propagation in TEBD stops prematurely
by Joseph Prentice 21 Aug '13

21 Aug '13

Hi all, I'm having a bit of trouble with getting a quench using the XXZ model to run in TEBD. I'm running the job on a Linux cluster, quenching Delta instantaneously from 3 to 6, and the program stops earlier than it should. I turned on the Verbose option, and it seems as though the imaginary time propagation works fine, but the real time propagation stops prematurely, with no error message. Does anyone have any idea why this has happened? It seems very odd. I will attach my Python script in case there is something wrong with it, and the output I obtained. Thanks very much, Joseph Prentice

2 1

susceptibility units
by Tadeusz Wasiutyński 12 Aug '13

12 Aug '13

I can not figured out what are the susceptibility units in the results of calculations. In tutorial ed-06 on V15 cluster (and also results of QMC that match perfectly) for T/J=10 I would expect \chi*T as for fully decoupled 15 spins 1/2 that is S(S+1)/3 eq 0.25. There is instead 0.2375133. Where is the problem? Best wishes Tadeusz

2 1

Re: [ALPS-users] Alps Not Installing
by dixonwille 12 Aug '13

12 Aug '13

Ok I solved it. It seems the order in which you set the variables maters. So I set the prefix first then the boost directory. Also the -D has to have a space after it for it to work. It also seems the prefix doesnt work as stated on the build from source webpage. I changed the prefix while running "ccmake ." And changed the option there. Here is what worked for me: cmake -D CMAKE_INSTALL_PREFIX:PATH=/storage/alps/2.1.1 -D Boost_ROOT_DIR:PATH=/root/Cluster/alps-2.1.1-r6176-src-with-boost/boost /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps But I suspect that removing the prefix would work. Also I added the :PATH to the prefix because that is what seemed to work for the Boost. But either way (online or this way) doesnt seem to change anything. Thanks for the help. What tipped me was what German said. When i switched the boost and the prefix these errors went away. I noticed this error changed when i removed and added space behind the -D tag. Hope this helps someone else out. Sent from Samsung tablet

1 0

Re: [ALPS-users] Alps Not Installing
by dixonwille 11 Aug '13

11 Aug '13

cmake -D Boost_ROOT_DIR:PATH=/path to alps directory/boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 /path to alps directory/alps I ran this and it still didn't work. It is giving me the same errors. Sent from Samsung tablet -------- Original message -------- From: Matthias Troyer <troyer(a)phys.ethz.ch> Date: 08/10/2013 7:45 PM (GMT-05:00) To: dixonwille <dixonwille(a)hotmail.com> Cc: Alps <comp-phys-alps-users(a)lists.phys.ethz.ch> Subject: Re: [ALPS-users] Alps Not Installing CMAKE requires the use of absolute paths and not ./... On Aug 10, 2013, at 16:41, dixonwille <dixonwille(a)hotmail.com> wrote: cmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps While I am in a freshly extracted directoryl of alps-2.1.1-r6176-src-with-boost.tar.gz -------- Original message -------- From: Matthias Troyer <troyer(a)phys.ethz.ch> Date: 08/10/2013 6:37 PM (GMT-05:00) To: dixonwille <dixonwille(a)hotmail.com>,comp-phys-alps-users(a)lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing What command do you run exactly? From the log it seems that you do not specify the correct directory for boost On Aug 10, 2013, at 15:43, dixonwille <dixonwille(a)hotmail.com> wrote: I extracted the download that includes boost. I cd into the un tared directory. In it has two folders, boost and alps. This is where I run the cmake command from. -------- Original message -------- From: Matthias Troyer <troyer(a)phys.ethz.ch> Date: 08/10/2013 5:38 PM (GMT-05:00) To: comp-phys-alps-users(a)lists.phys.ethz.ch Cc: comp-phys-alps-users(a)lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing It looks rom your log that you specify the wrong Directory for your Boost installation On Aug 10, 2013, at 14:44, Will Dixon <dixonwille(a)hotmail.com> wrote: I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting. -- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for rpc/rpc.h -- Looking for rpc/rpc.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/systeminfo.h -- Looking for sys/systeminfo.h - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for windows.h -- Looking for windows.h - not found -- Looking for C++ include valarray -- Looking for C++ include valarray - found -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) -- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx -- The Fortran compiler identification is GNU -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yes Falling back to CMake provied LAPACK/BLAS detection. -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for include files CMAKE_HAVE_PTHREAD_H -- Looking for include files CMAKE_HAVE_PTHREAD_H - found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- A library with BLAS API found. -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- SQLite Library: not found -- Found FFTW: /usr/lib/libfftw3.so -- LPSolve Library: not found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /storage/alps/2.1.1/lib/xml -- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- tebd will not be built -- Configuring incomplete, errors occurred! At first glance I thought it was HDF5 so I installed from source. But I also realized I needed szip again I installed from source. Then I get this error. -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) -- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_Fortran: /storage/openmpi/1.6.5/lib/libmpi_f90.so;/storage/openmpi/1.6.5/lib/libmpi_f77.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so

3 2

Re: [ALPS-users] Alps Not Installing
by dixonwille 11 Aug '13

11 Aug '13

cmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps While I am in a freshly extracted directoryl of alps-2.1.1-r6176-src-with-boost.tar.gz -------- Original message -------- From: Matthias Troyer <troyer(a)phys.ethz.ch> Date: 08/10/2013 6:37 PM (GMT-05:00) To: dixonwille <dixonwille(a)hotmail.com>,comp-phys-alps-users(a)lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing What command do you run exactly? From the log it seems that you do not specify the correct directory for boost On Aug 10, 2013, at 15:43, dixonwille <dixonwille(a)hotmail.com> wrote: > I extracted the download that includes boost. I cd into the un tared directory. In it has two folders, boost and alps. This is where I run the cmake command from. > > > > -------- Original message -------- > From: Matthias Troyer <troyer(a)phys.ethz.ch> > Date: 08/10/2013 5:38 PM (GMT-05:00) > To: comp-phys-alps-users(a)lists.phys.ethz.ch > Cc: comp-phys-alps-users(a)lists.phys.ethz.ch > Subject: Re: [ALPS-users] Alps Not Installing > > > It looks rom your log that you specify the wrong Directory for your Boost installation > > > > > On Aug 10, 2013, at 14:44, Will Dixon <dixonwille(a)hotmail.com> wrote: > >> I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting. >> >> -- The C compiler identification is GNU >> -- The CXX compiler identification is GNU >> -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc >> -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works >> -- Detecting C compiler ABI info >> -- Detecting C compiler ABI info - done >> -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ >> -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works >> -- Detecting CXX compiler ABI info >> -- Detecting CXX compiler ABI info - done >> -- Build type: Release >> -- Python interpreter /usr/bin/python >> -- Python interpreter ok : version 2.7.3 >> -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 >> -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include >> -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages >> -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so >> -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil >> -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions >> -- ALPS version: 2.1.1 >> -- Looking for rpc/rpc.h >> -- Looking for rpc/rpc.h - found >> -- Looking for stdarg.h >> -- Looking for stdarg.h - found >> -- Looking for sys/stat.h >> -- Looking for sys/stat.h - found >> -- Looking for sys/systeminfo.h >> -- Looking for sys/systeminfo.h - not found >> -- Looking for sys/types.h >> -- Looking for sys/types.h - found >> -- Looking for unistd.h >> -- Looking for unistd.h - found >> -- Looking for windows.h >> -- Looking for windows.h - not found >> -- Looking for C++ include valarray >> -- Looking for C++ include valarray - found >> -- Looking for Boost Source >> CMake Error at config/FindBoostSrc.cmake:85 (file): >> file Internal CMake error when trying to open file: >> /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp >> for reading. >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> CMake Error at config/FindBoostSrc.cmake:90 (MATH): >> math cannot parse the expression: " / 100000": syntax error, unexpected >> exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> CMake Error at config/FindBoostSrc.cmake:91 (MATH): >> math cannot parse the expression: " / 100 % 1000": syntax error, unexpected >> exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> CMake Error at config/FindBoostSrc.cmake:92 (MATH): >> math cannot parse the expression: " % 100": syntax error, unexpected >> exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> -- Found Boost Source: ./boost >> -- Boost Version: __ >> -- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so >> -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so >> -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx >> -- The Fortran compiler identification is GNU >> -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran >> -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works >> -- Detecting Fortran compiler ABI info >> -- Detecting Fortran compiler ABI info - done >> -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 >> -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yes >> Falling back to CMake provied LAPACK/BLAS detection. >> -- Looking for Fortran sgemm >> -- Looking for Fortran sgemm - found >> -- Looking for include files CMAKE_HAVE_PTHREAD_H >> -- Looking for include files CMAKE_HAVE_PTHREAD_H - found >> -- Looking for pthread_create in pthreads >> -- Looking for pthread_create in pthreads - not found >> -- Looking for pthread_create in pthread >> -- Looking for pthread_create in pthread - found >> -- Found Threads: TRUE >> -- A library with BLAS API found. >> -- A library with BLAS API found. >> -- Looking for Fortran cheev >> -- Looking for Fortran cheev - found >> -- A library with LAPACK API found. >> -- SQLite Library: not found >> -- Found FFTW: /usr/lib/libfftw3.so >> -- LPSolve Library: not found >> -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so >> -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) >> -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so >> -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND >> -- Python interpreter /usr/bin/python >> -- Python interpreter ok : version 2.7.3 >> -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 >> -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include >> -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages >> -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so >> -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil >> -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions >> -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include >> -- ALPS XML dir is /storage/alps/2.1.1/lib/xml >> -- Adding Boost dir: ./boost >> -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND >> -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND >> -- tebd will not be built >> -- Configuring incomplete, errors occurred! >> >> At first glance I thought it was HDF5 so I installed from source. But I also realized I needed szip again I installed from source. Then I get this error. >> >> -- Build type: Release >> -- Python interpreter /usr/bin/python >> -- Python interpreter ok : version 2.7.3 >> -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 >> -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include >> -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages >> -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so >> -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil >> -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions >> -- ALPS version: 2.1.1 >> -- Looking for Boost Source >> CMake Error at config/FindBoostSrc.cmake:85 (file): >> file Internal CMake error when trying to open file: >> /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp >> for reading. >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> CMake Error at config/FindBoostSrc.cmake:90 (MATH): >> math cannot parse the expression: " / 100000": syntax error, unexpected >> exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> CMake Error at config/FindBoostSrc.cmake:91 (MATH): >> math cannot parse the expression: " / 100 % 1000": syntax error, unexpected >> exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> CMake Error at config/FindBoostSrc.cmake:92 (MATH): >> math cannot parse the expression: " % 100": syntax error, unexpected >> exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) >> Call Stack (most recent call first): >> config/FindBoostForALPS.cmake:61 (find_package) >> CMakeLists.txt:248 (find_package) >> >> >> -- Found Boost Source: ./boost >> -- Boost Version: __ >> -- Found MPI_Fortran: /storage/openmpi/1.6.5/lib/libmpi_f90.so;/storage/openmpi/1.6.5/lib/libmpi_f77.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so

2 1

Re: [ALPS-users] Alps Not Installing
by dixonwille 11 Aug '13

11 Aug '13

I extracted the download that includes boost. I cd into the un tared directory. In it has two folders, boost and alps. This is where I run the cmake command from. -------- Original message -------- From: Matthias Troyer <troyer(a)phys.ethz.ch> Date: 08/10/2013 5:38 PM (GMT-05:00) To: comp-phys-alps-users(a)lists.phys.ethz.ch Cc: comp-phys-alps-users(a)lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing It looks rom your log that you specify the wrong Directory for your Boost installation On Aug 10, 2013, at 14:44, Will Dixon <dixonwille(a)hotmail.com> wrote: I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting. -- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for rpc/rpc.h -- Looking for rpc/rpc.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/systeminfo.h -- Looking for sys/systeminfo.h - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for windows.h -- Looking for windows.h - not found -- Looking for C++ include valarray -- Looking for C++ include valarray - found -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) -- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx -- The Fortran compiler identification is GNU -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yes Falling back to CMake provied LAPACK/BLAS detection. -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for include files CMAKE_HAVE_PTHREAD_H -- Looking for include files CMAKE_HAVE_PTHREAD_H - found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- A library with BLAS API found. -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- SQLite Library: not found -- Found FFTW: /usr/lib/libfftw3.so -- LPSolve Library: not found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /storage/alps/2.1.1/lib/xml -- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- tebd will not be built -- Configuring incomplete, errors occurred! At first glance I thought it was HDF5 so I installed from source. But I also realized I needed szip again I installed from source. Then I get this error. -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) -- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_Fortran: /storage/openmpi/1.6.5/lib/libmpi_f90.so;/storage/openmpi/1.6.5/lib/libmpi_f77.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx Falling back to CMake provied LAPACK/BLAS detection. -- A library with BLAS API found. -- A library with BLAS API found. -- A library with LAPACK API found. -- SQLite Library: not found -- LPSolve Library: not found -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /storage/alps/2.1.1/lib/xml -- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- tebd will not be built CMake Error: The following variables are used in this project, but they are set to NOTFOUND. Please set them or make sure they are set and tested correctly in the CMake files: HDF5_sz_LIBRARY_DEBUG (ADVANCED) linked by target "alps" in directory /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/src/alps HDF5_sz_LIBRARY_RELEASE (ADVANCED) linked by target "alps" in directory /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/src/alps -- Configuring incomplete, errors occurred! But it still says it can't find szip. I am following the instructions on http://alps.comp-phys.org/mediawiki/index.php/Building_ALPS_from_source I am using cmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps THANKS IN ADVANCED

2 1

Alps Not Installing
by Will Dixon 10 Aug '13

10 Aug '13

I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting. -- The C compiler identification is GNU-- The CXX compiler identification is GNU-- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc-- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works-- Detecting C compiler ABI info-- Detecting C compiler ABI info - done-- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++-- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works-- Detecting CXX compiler ABI info-- Detecting CXX compiler ABI info - done-- Build type: Release-- Python interpreter /usr/bin/python-- Python interpreter ok : version 2.7.3-- PYTHON_INCLUDE_DIRS = /usr/include/python2.7-- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include-- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages-- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so-- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil-- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions-- ALPS version: 2.1.1-- Looking for rpc/rpc.h-- Looking for rpc/rpc.h - found-- Looking for stdarg.h-- Looking for stdarg.h - found-- Looking for sys/stat.h-- Looking for sys/stat.h - found-- Looking for sys/systeminfo.h-- Looking for sys/systeminfo.h - not found-- Looking for sys/types.h-- Looking for sys/types.h - found-- Looking for unistd.h-- Looking for unistd.h - found-- Looking for windows.h-- Looking for windows.h - not found-- Looking for C++ include valarray-- Looking for C++ include valarray - found-- Looking for Boost SourceCMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading.Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2)Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2)Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2)Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) -- Found Boost Source: ./boost-- Boost Version: __-- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx-- The Fortran compiler identification is GNU-- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran-- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works-- Detecting Fortran compiler ABI info-- Detecting Fortran compiler ABI info - done-- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90-- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yesFalling back to CMake provied LAPACK/BLAS detection.-- Looking for Fortran sgemm-- Looking for Fortran sgemm - found-- Looking for include files CMAKE_HAVE_PTHREAD_H-- Looking for include files CMAKE_HAVE_PTHREAD_H - found-- Looking for pthread_create in pthreads-- Looking for pthread_create in pthreads - not found-- Looking for pthread_create in pthread-- Looking for pthread_create in pthread - found-- Found Threads: TRUE -- A library with BLAS API found.-- A library with BLAS API found.-- Looking for Fortran cheev-- Looking for Fortran cheev - found-- A library with LAPACK API found.-- SQLite Library: not found-- Found FFTW: /usr/lib/libfftw3.so -- LPSolve Library: not found-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND-- Python interpreter /usr/bin/python-- Python interpreter ok : version 2.7.3-- PYTHON_INCLUDE_DIRS = /usr/include/python2.7-- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include-- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages-- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so-- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil-- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions-- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include-- ALPS XML dir is /storage/alps/2.1.1/lib/xml-- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND-- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND-- tebd will not be built-- Configuring incomplete, errors occurred! At first glance I thought it was HDF5 so I installed from source. But I also realized I needed szip again I installed from source. Then I get this error. -- Build type: Release-- Python interpreter /usr/bin/python-- Python interpreter ok : version 2.7.3-- PYTHON_INCLUDE_DIRS = /usr/include/python2.7-- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include-- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages-- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so-- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil-- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions-- ALPS version: 2.1.1-- Looking for Boost SourceCMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading.Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2)Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2)Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2)Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package) -- Found Boost Source: ./boost-- Boost Version: __-- Found MPI_Fortran: /storage/openmpi/1.6.5/lib/libmpi_f90.so;/storage/openmpi/1.6.5/lib/libmpi_f77.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxxFalling back to CMake provied LAPACK/BLAS detection.-- A library with BLAS API found.-- A library with BLAS API found.-- A library with LAPACK API found.-- SQLite Library: not found-- LPSolve Library: not found-- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND-- Python interpreter /usr/bin/python-- Python interpreter ok : version 2.7.3-- PYTHON_INCLUDE_DIRS = /usr/include/python2.7-- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include-- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages-- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so-- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil-- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions-- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include-- ALPS XML dir is /storage/alps/2.1.1/lib/xml-- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND-- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_DEBUG-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;HDF5_sz_LIBRARY_RELEASE-NOTFOUND;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND-- tebd will not be builtCMake Error: The following variables are used in this project, but they are set to NOTFOUND.Please set them or make sure they are set and tested correctly in the CMake files:HDF5_sz_LIBRARY_DEBUG (ADVANCED) linked by target "alps" in directory /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/src/alpsHDF5_sz_LIBRARY_RELEASE (ADVANCED) linked by target "alps" in directory /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/src/alps -- Configuring incomplete, errors occurred! But it still says it can't find szip. I am following the instructions on http://alps.comp-phys.org/mediawiki/index.php/Building_ALPS_from_source I am usingcmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps THANKS IN ADVANCED

2 1

Re: [ALPS-users] Question concerning an initial state in TEBD
by Joseph Prentice 08 Aug '13

08 Aug '13

Hi Michael, I see, I thought that might be the case. I know very little about Fortran, but if it's possible to set up this initial Hamiltonian/state, I'd like to give it a go, even if I am unable to get it to work. Could I have further details on this please? Thank you, Joseph On 7 Aug 2013, at 11:00, <comp-phys-alps-users-request(a)lists.phys.ethz.ch> wrote: > Send Comp-phys-alps-users mailing list submissions to > comp-phys-alps-users(a)lists.phys.ethz.ch > > To subscribe or unsubscribe via the World Wide Web, visit > https://lists.phys.ethz.ch/listinfo/comp-phys-alps-users > or, via email, send a message with subject or body 'help' to > comp-phys-alps-users-request(a)lists.phys.ethz.ch > > You can reach the person managing the list at > comp-phys-alps-users-owner(a)lists.phys.ethz.ch > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Comp-phys-alps-users digest..." > > > Today's Topics: > > 1. Question concerning an initial state in TEBD (Joseph Prentice) > 2. Re: Question concerning an initial state in TEBD (Michael Wall) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Tue, 6 Aug 2013 12:25:40 +0000 > From: Joseph Prentice <Joseph.Prentice(a)physics.ox.ac.uk> > To: "<comp-phys-alps-users(a)lists.phys.ethz.ch>" > <comp-phys-alps-users(a)lists.phys.ethz.ch> > Subject: [ALPS-users] Question concerning an initial state in TEBD > Message-ID: > <747861816F6A5C47BE50FCA07F5B2B4A0DF3D2(a)EXCHNG16.physics.ox.ac.uk> > Content-Type: text/plain; charset="us-ascii" > > Hi again all, > > I just had a short question about the TEBD code in ALPS. I would like to study the evolution of an initial state that is a Neel state, but rotated by an angle /alpha about the y-axis, under the XXZ Hamiltonian. A Hamiltonian whose ground state would be the right one would simply have a magnetic field along the direction of /alpha that swaps direction at each site i.e. (-1)^l *(cos /alpha *S^z_l + sin /alpha *S^x_l) where l is the site number, but I can't see a way to put this into the code. Is alternating the sign of the interaction in this way possible? > Also, if there is another way of producing such a state in the TEBD code, it would be wonderful if someone pointed it out, I would be very grateful. > > Thank you very much, > > Joseph Prentice > > ------------------------------ > > Message: 2 > Date: Tue, 6 Aug 2013 14:31:20 -0600 > From: Michael Wall <mwall.physics(a)gmail.com> > To: comp-phys-alps-users(a)lists.phys.ethz.ch > Subject: Re: [ALPS-users] Question concerning an initial state in TEBD > Message-ID: > <CA+DwVMoeLK_TfLEi4DGHCkG7riYn3MHOZz6=E3TaPLcxcekBLQ(a)mail.gmail.com> > Content-Type: text/plain; charset="iso-8859-1" > > Hi Joseph, > > At present, the only initial states supported by tebd are ground states of > translation-invariant Hamiltonians or the 'kink' initial state used in the > spin tutorials. You can edit the source file tebd.f90 to write in another > product state of your choice. If this is the route you would like to > follow I can give you more details. The next generation of MPS codes for > ALPS will include much greater flexibility in the choice of initial state. > > -Michael > > > On Tue, Aug 6, 2013 at 6:25 AM, Joseph Prentice < > Joseph.Prentice(a)physics.ox.ac.uk> wrote: > >> Hi again all, >> >> I just had a short question about the TEBD code in ALPS. I would like to >> study the evolution of an initial state that is a Neel state, but rotated >> by an angle /alpha about the y-axis, under the XXZ Hamiltonian. A >> Hamiltonian whose ground state would be the right one would simply have a >> magnetic field along the direction of /alpha that swaps direction at each >> site i.e. (-1)^l *(cos /alpha *S^z_l + sin /alpha *S^x_l) where l is the >> site number, but I can't see a way to put this into the code. Is >> alternating the sign of the interaction in this way possible? >> Also, if there is another way of producing such a state in the TEBD code, >> it would be wonderful if someone pointed it out, I would be very grateful. >> >> Thank you very much, >> >> Joseph Prentice >

2 1

Question concerning an initial state in TEBD
by Joseph Prentice 06 Aug '13

06 Aug '13

Hi again all, I just had a short question about the TEBD code in ALPS. I would like to study the evolution of an initial state that is a Neel state, but rotated by an angle /alpha about the y-axis, under the XXZ Hamiltonian. A Hamiltonian whose ground state would be the right one would simply have a magnetic field along the direction of /alpha that swaps direction at each site i.e. (-1)^l *(cos /alpha *S^z_l + sin /alpha *S^x_l) where l is the site number, but I can't see a way to put this into the code. Is alternating the sign of the interaction in this way possible? Also, if there is another way of producing such a state in the TEBD code, it would be wonderful if someone pointed it out, I would be very grateful. Thank you very much, Joseph Prentice

2 1

Entropy calculations for classical model using Quantum-Wang-Landau
by Vipin Varma 02 Aug '13

02 Aug '13

Dear all, I am trying to use the Quantum-Wang-Landau (QWL) algorithm to calculate the entropy of a linear chain spin-1/2 model with Jxy=0 in a field h=1, which is classical but QWL seems to be suggested for entropy calculations. However with forty sites and down to low temperatures, I don't seem to be getting near the correct entropy density result of S ~ 0.4812 ... The parameter file is <<<<<<<<<<<<<<<<<<<<<<<<<< LATTICE="chain lattice" MODEL="spin" local_S=1/2 h=1 J = 1 Jxy = 0 CUTOFF = 500 {L=40} <<<<<<<<<<<<<<<<<<<<<<<<< and a partial output of entropy density versus temperature is <SNIP> </PARAMETERS> <legend show="true"/> <xaxis label="Temperature"/> <yaxis label="Entropy Density"/> <set label=""> <point><x>0.10000000000000001</x><y>0.065628773413218822</y></point> <point><x>0.20000000000000001</x><y>0.13394955300729872</y></point> <point><x>0.30000000000000004</x><y>0.24229259030929573</y></point> <point><x>0.40000000000000002</x><y>0.31481859757794478</y></point> <point><x>0.5</x><y>0.39826073000393336</y></point> <point><x>0.59999999999999998</x><y>0.46128739087861204</y></point> <point><x>0.69999999999999996</x><y>0.50938492873462538</y></point> <point><x>0.79999999999999993</x><y>0.5481023575910553</y></point> <point><x>0.89999999999999991</x><y>0.57776445729654646</y></point> <point><x>0.99999999999999989</x><y>0.59988758184662683</y></point> <point><x>1.0999999999999999</x><y>0.61635447545226674</y></point> <SNIP> I have tried changing the lattice length and cut-off but not much changes. Any advice on what I might be doing wrong will be greatly appreciated. With regards, Vipin

2 7

Jump to page:

2025

2024

2023

2022

2021

2020

2019

2018

2017

2016

2015

2014

2013

2012

2011

2010

2009

2008

2007

2006

2005

2004

Comp-phys-alps-users