cmake -D Boost_ROOT_DIR:PATH=/path to alps directory/boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 /path to alps directory/alps I ran this and it still didn't work. It is giving me the same errors.
Sent from Samsung tablet
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 7:45 PM (GMT-05:00) To: dixonwille dixonwille@hotmail.com Cc: Alps comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
CMAKE requires the use of absolute paths and not ./...
On Aug 10, 2013, at 16:41, dixonwille dixonwille@hotmail.com wrote:
cmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps While I am in a freshly extracted directoryl of alps-2.1.1-r6176-src-with-boost.tar.gz
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 6:37 PM (GMT-05:00) To: dixonwille dixonwille@hotmail.com,comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
What command do you run exactly? From the log it seems that you do not specify the correct directory for boost
On Aug 10, 2013, at 15:43, dixonwille dixonwille@hotmail.com wrote:
I extracted the download that includes boost. I cd into the un tared directory. In it has two folders, boost and alps. This is where I run the cmake command from.
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 5:38 PM (GMT-05:00) To: comp-phys-alps-users@lists.phys.ethz.ch Cc: comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
It looks rom your log that you specify the wrong Directory for your Boost installation
On Aug 10, 2013, at 14:44, Will Dixon dixonwille@hotmail.com wrote:
I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting.
-- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for rpc/rpc.h -- Looking for rpc/rpc.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/systeminfo.h -- Looking for sys/systeminfo.h - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for windows.h -- Looking for windows.h - not found -- Looking for C++ include valarray -- Looking for C++ include valarray - found -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
-- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx -- The Fortran compiler identification is GNU -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yes Falling back to CMake provied LAPACK/BLAS detection. -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for include files CMAKE_HAVE_PTHREAD_H -- Looking for include files CMAKE_HAVE_PTHREAD_H - found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- A library with BLAS API found. -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- SQLite Library: not found -- Found FFTW: /usr/lib/libfftw3.so -- LPSolve Library: not found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /storage/alps/2.1.1/lib/xml -- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- tebd will not be built -- Configuring incomplete, errors occurred!
At first glance I thought it was HDF5 so I installed from source. But I also realized I needed szip again I installed from source. Then I get this error.
-- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
-- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_Fortran: /storage/openmpi/1.6.5/lib/libmpi_f90.so;/storage/openmpi/1.6.5/lib/libmpi_f77.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so
I cannot help unless you send what you actually did and the output
On Aug 10, 2013, at 18:10, dixonwille dixonwille@hotmail.com wrote:
cmake -D Boost_ROOT_DIR:PATH=/path to alps directory/boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 /path to alps directory/alps
I ran this and it still didn't work. It is giving me the same errors.
Sent from Samsung tablet
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 7:45 PM (GMT-05:00) To: dixonwille dixonwille@hotmail.com Cc: Alps comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
CMAKE requires the use of absolute paths and not ./...
On Aug 10, 2013, at 16:41, dixonwille dixonwille@hotmail.com wrote:
cmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps While I am in a freshly extracted directoryl of alps-2.1.1-r6176-src-with-boost.tar.gz
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 6:37 PM (GMT-05:00) To: dixonwille dixonwille@hotmail.com,comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
What command do you run exactly? From the log it seems that you do not specify the correct directory for boost
On Aug 10, 2013, at 15:43, dixonwille dixonwille@hotmail.com wrote:
I extracted the download that includes boost. I cd into the un tared directory. In it has two folders, boost and alps. This is where I run the cmake command from.
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 5:38 PM (GMT-05:00) To: comp-phys-alps-users@lists.phys.ethz.ch Cc: comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
It looks rom your log that you specify the wrong Directory for your Boost installation
On Aug 10, 2013, at 14:44, Will Dixon dixonwille@hotmail.com wrote:
I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting.
-- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for rpc/rpc.h -- Looking for rpc/rpc.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/systeminfo.h -- Looking for sys/systeminfo.h - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for windows.h -- Looking for windows.h - not found -- Looking for C++ include valarray -- Looking for C++ include valarray - found -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file: /root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
-- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx -- The Fortran compiler identification is GNU -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yes Falling back to CMake provied LAPACK/BLAS detection. -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for include files CMAKE_HAVE_PTHREAD_H -- Looking for include files CMAKE_HAVE_PTHREAD_H - found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- A library with BLAS API found. -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- SQLite Library: not found -- Found FFTW: /usr/lib/libfftw3.so -- LPSolve Library: not found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /storage/alps/2.1.1/lib/xml -- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/include d
Dear Dixon (?), In your error log you have:
CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file:
/root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp
Meaning an error on the addrest to the boost libraries: try this: cmake -D Boost_ROOT_DIR:PATH=/root/Cluster/alps-2.1.1-r6176-src-with-boost/boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1**/alps
Regards,
German
On Sun, Aug 11, 2013 at 2:27 AM, Matthias Troyer troyer@phys.ethz.chwrote:
I cannot help unless you send what you actually did and the output
On Aug 10, 2013, at 18:10, dixonwille dixonwille@hotmail.com wrote:
cmake -D Boost_ROOT_DIR:PATH=/*path to alps directory*/boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 /*path to alps directory*/alps
I ran this and it still didn't work. It is giving me the same errors.
Sent from Samsung tablet
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 7:45 PM (GMT-05:00) To: dixonwille dixonwille@hotmail.com Cc: Alps comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
CMAKE requires the use of absolute paths and not ./...
On Aug 10, 2013, at 16:41, dixonwille dixonwille@hotmail.com wrote:
cmake -D Boost_ROOT_DIR:PATH=./boost -DCMAKE_INSTALL_PREFIX=/storage/alps/2.1.1 ./alps While I am in a freshly extracted directoryl of alps-2.1.1-r6176-src-with-boost.tar.gz
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 6:37 PM (GMT-05:00) To: dixonwille dixonwille@hotmail.com, comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
What command do you run exactly? From the log it seems that you do not specify the correct directory for boost
On Aug 10, 2013, at 15:43, dixonwille dixonwille@hotmail.com wrote:
I extracted the download that includes boost. I cd into the un tared directory. In it has two folders, boost and alps. This is where I run the cmake command from.
-------- Original message -------- From: Matthias Troyer troyer@phys.ethz.ch Date: 08/10/2013 5:38 PM (GMT-05:00) To: comp-phys-alps-users@lists.phys.ethz.ch Cc: comp-phys-alps-users@lists.phys.ethz.ch Subject: Re: [ALPS-users] Alps Not Installing
It looks rom your log that you specify the wrong Directory for your Boost installation
On Aug 10, 2013, at 14:44, Will Dixon dixonwille@hotmail.com wrote:
I am getting errors when trying to compile Alps from source using gcc 4.8.1 and installed hdf5 through apt-get install libhdf5-serial-dev. I am using Ubuntu server 12.04 LTS. I also have openMPI 1.6.5 installed. Here is the error I am getting.
-- The C compiler identification is GNU -- The CXX compiler identification is GNU -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- Check for working C compiler: /storage/gcc/4.8.1/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- Check for working CXX compiler: /storage/gcc/4.8.1/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Build type: Release -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- ALPS version: 2.1.1 -- Looking for rpc/rpc.h -- Looking for rpc/rpc.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/systeminfo.h -- Looking for sys/systeminfo.h - not found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for windows.h -- Looking for windows.h - not found -- Looking for C++ include valarray -- Looking for C++ include valarray - found -- Looking for Boost Source CMake Error at config/FindBoostSrc.cmake:85 (file): file Internal CMake error when trying to open file:
/root/Cluster/alps-2.1.1-r6176-src-with-boost/alps/./boost/boost/version.hpp for reading. Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:90 (MATH): math cannot parse the expression: " / 100000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:91 (MATH): math cannot parse the expression: " / 100 % 1000": syntax error, unexpected exp_DIVIDE, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
CMake Error at config/FindBoostSrc.cmake:92 (MATH): math cannot parse the expression: " % 100": syntax error, unexpected exp_MOD, expecting exp_OPENPARENT or exp_NUMBER (2) Call Stack (most recent call first): config/FindBoostForALPS.cmake:61 (find_package) CMakeLists.txt:248 (find_package)
-- Found Boost Source: ./boost -- Boost Version: __ -- Found MPI_C: /storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- Found MPI_CXX: /storage/openmpi/1.6.5/lib/libmpi_cxx.so;/storage/openmpi/1.6.5/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libnsl.so;/usr/lib/x86_64-linux-gnu/libutil.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/libdl.so -- MPI compiler was /storage/openmpi/1.6.5/bin/mpicxx -- The Fortran compiler identification is GNU -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- Check for working Fortran compiler: /storage/gcc/4.8.1/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- Checking whether /storage/gcc/4.8.1/bin/gfortran supports Fortran 90 -- yes Falling back to CMake provied LAPACK/BLAS detection. -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for include files CMAKE_HAVE_PTHREAD_H -- Looking for include files CMAKE_HAVE_PTHREAD_H - found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- A library with BLAS API found. -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. -- SQLite Library: not found -- Found FFTW: /usr/lib/libfftw3.so -- LPSolve Library: not found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- Found HDF5: debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/lib/python2.7/dist-packages -- PYTHON_LIBRARY = /usr/lib/python2.7/config/libpython2.7.so -- PYTHON_EXTRA_LIBS =-lssl -lcrypto -lssl -lcrypto -L/usr/lib -lz -lpthread -ldl -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -Wl,-O1 -Wl,-Bsymbolic-functions -- Numpy include in /storage/numpy/1.7.0/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /storage/alps/2.1.1/lib/xml -- Adding Boost dir: ./boost -- HDF5: /usr/include debug;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so;optimized;/usr/lib/libhdf5_hl.so;/usr/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/include d
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