Hi,
I am trying to install /alps-2.1.1-r6832-src-with-boost in our hpc center. We have RHEL 6.2 installed.Mosty of the software is nfs mounted. I am failing to configure it with our hdf5 installation. Im trying to build it as
cmake \ -D CMAKE_INSTALL_PREFIX=/project/packages/alps \ -D Boost_ROOT_DIR:PATH=../../boost \ -D BUILD_SHARED_LIBS=OFF \ -D HDF5_DIR=/usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2 \ -D HDF5_INCLUDE_DIR=/usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/include \ -D HDF5_LIBRARIES=/usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/lib/libhdf5.so \ -D ALPS_BUILD_FORTRAN=OFF \ -D FFTW_LIBRARIES=/usr/local/packages/fftw/3.3.2/gcc-4.4.6/lib \ -D LAPACK_LIBRARY=/usr/local/packages/lapack/3.4.0/gcc-4.4.6/lib/liblapack.a \ -D BLAS_LIBRARY=/usr/local/packages/lapack/3.4.0/gcc-4.4.6/lib/libblas.a \ -D FFTW_INCLUDE_DIR=/usr/local/packages/fftw/3.3.2/gcc-4.4.6/include ..
We build most of our packages from source. Im using: gcc-4.4.6 (RHEL default) openmpi-1.6.2 hdf5-1.8.10 (serial or parallel) python-2.7.3 lapack/blas 3.4.0 fftw-3.3.2
Currently cmake fails to configure with the following error. <snip> -- Found Boost Source: ../../boost -- Boost Version: __ -- Adding Boost dir: ../../boost -- MPI compiler was /usr/local/packages/openmpi/1.6.2/gcc-4.4.6/bin/mpicxx -- LAPACK DEBUG::LAPACK_LIBRARY = /usr/local/packages/lapack/3.4.0/gcc-4.4.6/lib/liblapack.a -- LPSolve Library: not found -- Could NOT find SZIP (missing: SZIP_LIBRARIES SZIP_INCLUDE_DIRS) -- HDF5: /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/include /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Python interpreter /usr/local/packages/Python/2.7.3/gcc-4.4.6/bin/python -- Python interpreter ok : version 2.7.3 -- PYTHON_INCLUDE_DIRS = /usr/local/packages/Python/2.7.3/gcc-4.4.6/include/python2.7 -- PYTHON_NUMPY_INCLUDE_DIR = /usr/local/packages/Python/2.7.3/gcc-4.4.6/lib/python2.7/site-packages/numpy/core/include -- PYTHON_SITE_PKG = /usr/local/packages/Python/2.7.3/gcc-4.4.6/lib/python2.7/site-packages -- PYTHON_LIBRARY = /usr/local/packages/Python/2.7.3/gcc-4.4.6/lib/python2.7/config/libpython2.7.a -- PYTHON_EXTRA_LIBS =-lpthread -ldl -llapack -lblas -lutil -- PYTHON_LINK_FOR_SHARED = -Xlinker -export-dynamic -- Numpy include in /usr/local/packages/Python/2.7.3/gcc-4.4.6/lib/python2.7/site-packages/numpy/core/include -- ALPS XML dir is /project/bthakur/packages/alps/lib/xml -- HDF5: /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/include /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- HDF5: /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/include /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- tebd will not be built -- HDF5: /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/include /usr/local/packages/hdf5/1.8.10/gcc-4.4.6-openmpi-1.6.2/lib/libhdf5.so HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND;HDF5_DLL-NOTFOUND;HDF5_HL_DLL-NOTFOUND -- Configuring incomplete, errors occurred!
I have tried various options but ended with same error. It seems its hdf5 library which is not detected correctly. The library is in path though. Maybe Im missing something very simple. Any help would be appreciated.
Regards, Bhupender.